HOME

Malaria IDC Strain Comparison Database

February 9, 2010

Oligo ID	PlasmoDB ID	Description
d2691_2	PFD1205w	predicted integral membrane protein

		3D7	Dd2	HB3

3D7 isolate
OligoID	Status	Maximum Hour	Minimum Hour	Amplitude (log2)	Score (%)	CGH %3D7	Avg. Med. Intensity
d2691_2	UNIQUE	1	38	1.6	69	N/A	107.4

Dd2 isolate
OligoID	Status	Maximum Hour	Minimum Hour	Amplitude (log2)	Score (%)	CGH %3D7	Avg. Med. Intensity
d2691_2	UNIQUE	N/A	N/A	N/A	N/A	25	97

HB3 isolate
OligoID	Status	Maximum Hour	Minimum Hour	Amplitude (log2)	Score (%)	CGH %3D7	Avg. Med. Intensity
d2691_2	UNIQUE	N/A	N/A	N/A	N/A	30	109.2

Oligo Sequence

5' TATAATGGTTATAGGATATATGCTTAAAATTTGTTTATGTTCATGGGCTTGTGAAATAATTACGGCATCA

Automated Predictions	Description
chr4.gen_135	61% identity to 77% of probable integral membrane protein PFB0950w - malaria parasite (Plasmodium falciparum)
chr4.glm_287	61% identity to 77% of probable integral membrane protein PFB0950w - malaria parasite (Plasmodium falciparum)
chr4.phat_268	61% identity to 77% of probable integral membrane protein PFB0950w - malaria parasite (Plasmodium falciparum)